BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F10LP1|AL428766
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1641 1701 0.0
>3x_Contig1641
Length = 13261
Score = 1701 bits (857), Expect = 0.0
Identities = 857/857 (100%)
Strand = Plus / Plus
Query: 2 aaaagtcttcatcaagagtagacgtggttccgcggtcgttgtgaataacactccacaatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12125 aaaagtcttcatcaagagtagacgtggttccgcggtcgttgtgaataacactccacaatc 12184
Query: 62 gaacttgccaaacctggccagtacgaaatcaaggaaaaattccttctcctcgcgctccag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12185 gaacttgccaaacctggccagtacgaaatcaaggaaaaattccttctcctcgcgctccag 12244
Query: 122 acgttcctctttcaacgtagcatccgacaggcatttcatcccaatgtcttctaacggatc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12245 acgttcctctttcaacgtagcatccgacaggcatttcatcccaatgtcttctaacggatc 12304
Query: 182 ttctagaagatcttccgttgttgtcatgccttcatcaactttgcccgcatcttccgcgaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12305 ttctagaagatcttccgttgttgtcatgccttcatcaactttgcccgcatcttccgcgaa 12364
Query: 242 tccaaggagagaaagcttcacgacgaatccatctatgtctagaaggaactctgtctctca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12365 tccaaggagagaaagcttcacgacgaatccatctatgtctagaaggaactctgtctctca 12424
Query: 302 gtttagacgtgagtctatgcaagcaggtttcattgatatgcccataaaacaaagctctca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12425 gtttagacgtgagtctatgcaagcaggtttcattgatatgcccataaaacaaagctctca 12484
Query: 362 accccctccttcatccgtatgtgccgttggatcattcaatggctttgcaaaaccttggtc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12485 accccctccttcatccgtatgtgccgttggatcattcaatggctttgcaaaaccttggtc 12544
Query: 422 tggcgatgaggataagttgttggtagaaaaacgtcaaaggtaccacttgtccattgatga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12545 tggcgatgaggataagttgttggtagaaaaacgtcaaaggtaccacttgtccattgatga 12604
Query: 482 gctttcaatcttgttacctcatagatcagaacaagagatccaatggagaatggattcgtt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12605 gctttcaatcttgttacctcatagatcagaacaagagatccaatggagaatggattcgtt 12664
Query: 542 acatataacgcctagcgatgcagttagtactgctagtccttccgccaatgttaatcaatc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12665 acatataacgcctagcgatgcagttagtactgctagtccttccgccaatgttaatcaatc 12724
Query: 602 gagttcttcagatgaggtccactctacttactcaccagatactgccgtagaggagcatga 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12725 gagttcttcagatgaggtccactctacttactcaccagatactgccgtagaggagcatga 12784
Query: 662 cgacattgacgatgttgatgttgatgtagagattgttggccgcatggaagactctattgc 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12785 cgacattgacgatgttgatgttgatgtagagattgttggccgcatggaagactctattgc 12844
Query: 722 cccaactcagctaagagatgaatctcctacgttttctcaaacatcttcgactggttcttc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12845 cccaactcagctaagagatgaatctcctacgttttctcaaacatcttcgactggttcttc 12904
Query: 782 cgctcgtgagagatcgccagtgttttcaccggacgctcattccttgagagaccattctcc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12905 cgctcgtgagagatcgccagtgttttcaccggacgctcattccttgagagaccattctcc 12964
Query: 842 aactatttctgatgtga 858
|||||||||||||||||
Sbjct: 12965 aactatttctgatgtga 12981
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5139
Number of Sequences: 1807
Number of extensions: 5139
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)